• Structure ID: 2VM6_A55_A135
Field Value
Uniprot ID Q16548
Experiment ID 2VM6
Source DB PDB
Motif 3-helix bundle
Motif ID 2VM6_A55_A135
Chain A
Start 55
End 135
Length 81
Protein partners BCL2L11 (O43521)
Resolution, Å 2.2
Rg, Å 13.435859
SASA, Ų 5770.9844
Experiment type X-ray
Surface K 0.7344118
Protein name Bcl-2-related protein A1
Inner HB 24
Experiment name Human Bcl2-A1 in complex with Bim-BH3 peptide
Organism Homo sapiens
Inner HP 95
taxonID 9606
Inner disulph. 0
outer_hb 11
Protein weight, Da 20101.154
Outer Disulph 0
Motif mol. weight, Da 9406.834
Motif weight % in protein 46.79748
Has binding sites No
α-helices 3
β-strands 0
Coils 4
α-helices lenght, aa 51
β-strands length, aa 0
Coil length, aa 30
0%
25%
50%
75%
100%

Modification

55
CYS
56
LEU
57
ASP
58
ASN
59
VAL
60
ASN
61
VAL
62
VAL
63
SER
64
VAL
65
ASP
66
THR
67
ALA
68
ARG
69
THR
70
LEU
71
PHE
72
ASN
73
GLN
74
VAL
75
MET
76
GLU
77
LYS
78
GLU
79
PHE
80
GLU
81
ASP
82
GLY
83
ILE
84
ILE
85
ASN
86
TRP
87
GLY
88
ARG
89
ILE
90
VAL
91
THR
92
ILE
93
PHE
94
ALA
95
PHE
96
GLU
97
GLY
98
ILE
99
LEU
100
ILE
101
LYS
102
LYS
103
LEU
104
LEU
105
ARG
106
GLN
107
GLN
108
ILE
109
ALA
110
PRO
111
ASP
112
VAL
113
ASP
114
THR
115
TYR
116
LYS
117
GLU
118
ILE
119
SER
120
TYR
121
PHE
122
VAL
123
ALA
124
GLU
125
PHE
126
ILE
127
MET
128
ASN
129
ASN
130
THR
131
GLY
132
GLU
133
TRP
134
ILE
135
ARG

On this page you can see 3D representation of the protein chain you choose and its basic annotation.

You also can see its primary and secondary structure.

Please select a single amino acid residue you would like to modify. Residues that can be modified are shown in white squares while not available ones are on gray background.

When you select one, system will present you a list of available PTMs to be applied. Please find one and press "Run calculation" button.

Site will enqueue your task to be calculated and then you'll get the report. Example of a report can be found here.

Warning: not every structure can be correctly modified. Some structures in PDB database are not correct enough. Unfortunately, there is no way to predict such problems before calculation is started, so there is always a risk to get an error because of bad structure.